Skip to main content

Table 1 Primer sets used for PCR analysis

From: RNA analysis based on a small number of manually isolated fixed cells (RNA-snMIFxC) to profile stem cells from human deciduous tooth-derived dental pulp cells

Target gene

Primer sequence (5’-3’)

Amplicon size (bp)

Sequence ID

Used for first PCR

ALP

Forward: TGG CCC CCA TGC TGA GTG ACA C

Reverse: TGG CGC AGG GGC ACA GCA GAC

160

NM_000478.4

OCT3/4

Forward: ATT TCA CCA GGC CCC CGG CT

Reverse: GCT GAT CTG CTG CAG TGT GGG

434

NM_002701.4

SOX2

Forward: TAA ATA CCG GCC CCG GCG GA

Reverse: AGG TCC ATT CCC CCG CCC TC

131

NM_003106.2

GAPDH

Forward: TCC AAA ATC AAG TGG GGC GAT GCT GGC GCT GAG TAC

Reverse: GTT GTC ATA CTT CTC ATG GTT CAC ACC CAT GAC GAA

180

NM_002046

Used for nested PCR

ALP

Forward: CTA AGT GAC ACA GAC AAG AAG

Reverse: GGC ACA GCA GAC TGC GCC TGG

140

NM_000478.4

OCT3/4

Forward: GGG ACA CCT GGC TTC GGA TTT CGC

Reverse: TCT TTC TGC AGA GCT TTG ATG TCC TG

428

NM_002701.4

SOX2

Forward: AGC TAC AGC ATG ATG CAG GAC CAG C

Reverse: GTC ATG GAG TTG TAC TGC AGG GCG

125

NM_003106.2

GAPDH

Forward: GTC GTG GAG TCC ACT GGC GTC

Reverse: ACA TGG GGG CAT CAG CAG AGG

109

NM_002046

  1. Abbreviations: ALP, alkaline phosphatase; OCT3/4, octamer-binding transcription factor 3/4; SOX2, sex determining region Y-box 2; GAPDH, glyceraldehyde 3-phosphate dehydrogenase