Table 7 Average percentage for the predicted motifs and the selected motifs by each method. MOTIFSIM achieves higher performance than other methods
% of Motifs Correctly Identified | ||||||
|---|---|---|---|---|---|---|
Motif Category | USW | AKL | ALLR | PCC | CS | MOTIFSIM |
Predicted motifs | 22% | 1% | 0% | 0% | 15% | 31% |
Selected motifs from TRANSFAC | 61% | 100% | 100% | 100% | 85% | 98% |
Average percentage | 41.5% | 50.5% | 50% | 50% | 50% | 64.5% |