Fig. 2
Effects of Nrep on parameter estimates (simulated data). Bootstrapping results (100 iterations) from simulated RNA-seq data consisting of 10,000 genes × 80 samples with PsimDEG = 20% are shown. Vertical axes for the boxplots indicate: (a) PDEG, (b) AS, and (c) AUC values. Horizontal axes indicate the Nrep values (3, 6, …, 30). It can be seen that PDEG and AUC values increase as a function of Nrep, but AS values do not