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Table 2 Primer sequences for EGFR and GAPDH transcripts used for real-time quantitative reverse transcriptase polymerase chain reaction

From: Influence of RT-qPCR Primer Position on EGFR Interference Efficacy in Lung Cancer Cells

Name

Forward

Exon

Sequence

Locationa

Reverseb

Exon

Sequence

Locationa

Length (bp)

q1

EGFR 370 F

2

GGCACTTTTGAAGATCATTTTCTC

c.370_393

EGFR 514R

3

CTGTGTTGAGGGCAATGAG

c.514_532

163

q2

EGFR 1089 F

7

CGAGGGCAAATACAGCTT

c.1089_1106

EGFR 1263R

9

AAATTCACCAATACCTATT

c.1263_1281

193

q3

EGFR 2034 F

15

GGCAGGAGTCATGGGAGAA

c.2034_2052

EGFR 2168R

17

GCGATGGACGGGATCTTAG

c.2168_2186

153

GAPDH

GAPDH 240 F

3

TTGCCATCAATGACCCCTTCA

c.240_260

GAPDH 395R

5

CGCCCCACTTGATTTTGGA

c.395_413

173

GAPDH 820 F

8

TGAACGGGAAGCTCACTGG

c.820_837

GAPDH 1106R

9

TCCACCACCCTGTTGCTGTA

c.1106_1125

306

GAPDH 1016 F

8

ACCCACTCCTCCACCTTTG

c.1016_1034

GAPDH 1175R

9

CTCTTGTGCTCTTGCTGGG

c.1175_1193

177

  1. aReference sequence: EGFR NM 005228.3,GAPDH NM 002046.3
  2. bThe reverse primers were also used to initiate cDNA synthesis