| Datasets |  | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Homo Sapiens | Mus Musculus | Saccharomyces Cerevisiae | Â | ||||||||||||||
Tool Name | hm01g* | hm04g* | hm08m | hm15g* | hm17g* | hm19g* | hm22g* | hm22m | mus04m | mus06g | mus10g | mus11m | yst02g | yst03m | yst06g | yst09g* | Ref. |
AlignACE | Â | Â | x | Â | Â | Â | Â | Â | x | x | x | x | Â | x | Â | Â | 29 |
ANN-Spec | Â | Â | x | Â | Â | Â | Â | x | x | x | x | x | x | x | x | Â | 29 |
ChIPMunk | x | x | Â | x | x | x | x | Â | Â | Â | Â | Â | Â | Â | Â | x | 31 |
Consensus | Â | Â | Â | Â | Â | Â | Â | Â | x | x | x | x | Â | x | Â | Â | 29 |
DMINDA | x | x | Â | x | x | x | x | Â | Â | Â | Â | Â | Â | Â | Â | x | 32 |
GLAM | Â | Â | x | Â | Â | Â | Â | x | x | x | x | x | x | x | x | Â | 29 |
Improbizer | Â | Â | x | Â | Â | Â | Â | x | x | x | x | x | x | x | x | Â | 29 |
MEME (older version) | Â | Â | x | Â | Â | Â | Â | x | x | x | Â | x | x | x | x | Â | 29 |
MEME (v. 4.11.4) | x | x | Â | x | x | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | 3 |
MITRA | Â | Â | x | Â | Â | Â | Â | x | x | x | x | x | x | x | x | Â | 29 |
MotifSampler | Â | Â | x | Â | Â | Â | Â | x | x | x | Â | x | x | x | x | Â | 29 |
oligodyad-analysis | Â | Â | x | Â | Â | Â | Â | x | x | x | x | Â | x | x | x | Â | 29 |
peak-motifs | x | x | Â | x | x | x | x | Â | Â | Â | Â | Â | Â | Â | Â | x | 33 |
QuickScore | Â | Â | x | Â | Â | Â | Â | Â | Â | x | x | Â | x | x | x | Â | 29 |
SeSiMCMC | Â | Â | x | Â | Â | Â | Â | x | x | x | x | x | x | x | x | Â | 29 |
STEME | x | x | Â | x | Â | Â | x | Â | Â | Â | Â | Â | Â | Â | Â | Â | 34 |
Weeder | Â | Â | x | Â | Â | Â | Â | x | x | x | x | x | x | x | x | Â | 29 |
XXmotif | x | x | Â | x | x | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | 35 |
YMF | Â | Â | x | Â | Â | Â | Â | x | x | x | x | x | x | x | x | Â | 29 |