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Table 1 RT-PCR Primers

From: Use of RNA Immunoprecipitation Method for Determining Sinorhizobium meliloti RNA-Hfq Protein Associations In Vivo

 

Target

Primer name

Left primer sequence (5′-3′)

Primer name

Right primer sequence (5′-3′)

Reference

1

Smrc7

MG3462

GCACTCATACAATGCCGTGA

MG3463

CTCTTTGAAAGCGGGACAAA

This work

2

SMrc15

MG2290

GGTGCATCTAGCGGCTTTCT

MG2291

GGGCCCTTTCAGTTGTGAAG

[11]

3

SMrc16

MG2292

CCACCGCAGCAGCTGTT

MG2293

GGCCCTTGTAGTTGTGAAGGTA

[11]

4

SMrc45

MG2294

TCGATTAGGTGAGGTTATCG

MG2295

CGGTTGGCCGGAATAGC

[11]

5

rRNA-16S

AB2777

GATAAGCCGAGAGGAAGGTG

AB2778

GTGTAGCCCAGCCCGTAAG

[40]

6

smelA075

RJ11

GTCGAAGCGCTGTACCT

RJ16

GGGAGGAGGTGGCTCGGGG

This work

7

Intergenic region between Smc00849-Smc00850

In850F

ATTTCTTCAATGACGTTCTCGTCA

In849R

ATACGTTCAAATTTTATCAT

[31]